PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.713
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 186aa    MW: 21547 Da    PI: 6.368
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.713genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding44.92.6e-14100144347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +WT++E+ +++++ k++G+g+W+ Iar    +Rt+ q+ s+ qky
  evm.model.AsparagusV1_04.713 100 PWTEDEHIRFLEGLKRYGKGDWRNIARWSVRTRTATQVASHAQKY 144
                                   8**************************9999*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MEPQLTRTWT RSEDKVFENS LVRYPEGTPN RWCLIALQVP GKSPDDVRVH YQALVQDIEA  60
IDCGAVELPE YEDDEDDDGF SPRIAFGSKT KREERKRGTP WTEDEHIRFL EGLKRYGKGD  120
WRNIARWSVR TRTATQVASH AQKYFLRQQK SGKNKESKRK SIHDITEDSI DEITEPKSIH  180
PCDPM*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04760.17e-58MYB family protein