PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.697 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NF-YB | ||||||||
Protein Properties | Length: 122aa MW: 14026.3 Da PI: 4.3748 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 42.4 | 1.7e-13 | 3 | 71 | 27 | 95 |
NF-YB 27 iskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 + kda e fi ++++ a+d c++ +r+tin+dd+l a+ ++ f +++epl++ l+++r+ ++ evm.model.AsparagusV1_04.697 3 VQKDALLAFAESTRIFIHYLSATANDICKESRRQTINADDVLKAIEEIEFPEFIEPLRASLEEFRKKNA 71 567888888899999**************************************************8765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 122 aa Download sequence |
MSVQKDALLA FAESTRIFIH YLSATANDIC KESRRQTINA DDVLKAIEEI EFPEFIEPLR 60 ASLEEFRKKN ASKRSATNAK ARESRKKQRS DNEEPRENEE HAEEVAEEEE KEEGEEPDEN 120 E* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G27470.1 | 2e-22 | NF-YB family protein |