PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.550

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 527aa MW: 58298.4 Da PI: 6.0362

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.550	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.4	0.00015	351	383	18	55
HHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 18 safeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++ L++++ + +K + a++L +A++YI+ Lq evm.model.AsparagusV1_04.550 351 DRITALQQIVSPF-----GKTDTASVLLEAINYIRFLQ 383 6788888888887.....8******************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 527 aa Download sequence
MEGSEASVAS SSPTPNWWEI HTNPISSWNA MNHRWQPHPS SSCEDQDMSN ISTTSFTNAS 60 NHSGLSMDSS SAELSTEPGE NHLWSQVLFG AENGGGDLNN NHNDTDNFLK VLTSKNLTTE 120 MFNNPACDYL KKLDSSWDQL TNHTQINPLD HRQLNSYNNG ALIEPERLTT LSDLVSNWSI 180 APPNSTCNVP LNPSMAQFSP SNISQIKHEN PNFSSYLPPY HQDHIGSPFN NGGMGYQVAL 240 NNSMLGINNK FYNGISSENA RNLSDLISFG SLNKPPMEFR ASTKPSSFDS KKQGYETSSS 300 TKGSGKSSGT TSEGKKKRSE DSSETLFKKS KHENSNASSV KLQPPKVKLG DRITALQQIV 360 SPFGKTDTAS VLLEAINYIR FLQEQVQLLS DPYMKSNANK DHNSWGGLER KEKGDPKLDL 420 RSRGCEDDEF AILYFQQIEG LVKKRDLWSA DDEANMMTSG RADDELAIGE VLIEAKTTTS 480 FLLLAVGGDG EANTTKGRHI EAVRVLFDGR VSRRWWWRSE ILRGRG*

Sequence ? help Back to Top

Protein Sequence Length: 527 aa Download sequence

MEGSEASVAS SSPTPNWWEI HTNPISSWNA MNHRWQPHPS SSCEDQDMSN ISTTSFTNAS  60
NHSGLSMDSS SAELSTEPGE NHLWSQVLFG AENGGGDLNN NHNDTDNFLK VLTSKNLTTE  120
MFNNPACDYL KKLDSSWDQL TNHTQINPLD HRQLNSYNNG ALIEPERLTT LSDLVSNWSI  180
APPNSTCNVP LNPSMAQFSP SNISQIKHEN PNFSSYLPPY HQDHIGSPFN NGGMGYQVAL  240
NNSMLGINNK FYNGISSENA RNLSDLISFG SLNKPPMEFR ASTKPSSFDS KKQGYETSSS  300
TKGSGKSSGT TSEGKKKRSE DSSETLFKKS KHENSNASSV KLQPPKVKLG DRITALQQIV  360
SPFGKTDTAS VLLEAINYIR FLQEQVQLLS DPYMKSNANK DHNSWGGLER KEKGDPKLDL  420
RSRGCEDDEF AILYFQQIEG LVKKRDLWSA DDEANMMTSG RADDELAIGE VLIEAKTTTS  480
FLLLAVGGDG EANTTKGRHI EAVRVLFDGR VSRRWWWRSE ILRGRG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31050.1	1e-33	bHLH family protein