PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.405 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 261aa MW: 28755.4 Da PI: 10.0485 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 51.4 | 2.4e-16 | 40 | 84 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE+ ++++a +++G W++I +++g ++t+ q++s+ qk+ evm.model.AsparagusV1_04.405 40 RERWTEEEHHKFLEALRLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 84 78******************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
MESFSLETPS INGVQSEENH SSRDVFAPKV RKPYTITKQR ERWTEEEHHK FLEALRLYGR 60 AWRRIEEHVG TKTAVQIRSH AQKFFTKVVK ESTANGAGKV KPIEIPPPRP KRKPVHPYPR 120 KFGTSSNNGT LNIGKLGRSS SPILSGSEQG NGSPTSVLSA FGSDTMSSFL SSLPNSCTSP 180 VTSAAGSNEQ ETSIEEEKQN HSPMVNLLTF LXXXXRPSLW RPCFIKGSFI KGCTSSLPQA 240 IWENCSGGGF TKSVAFQHCE * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 2e-46 | MYB_related family protein |