PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.3526 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | GRAS | ||||||||
Protein Properties | Length: 139aa MW: 15671.2 Da PI: 9.9437 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 103.6 | 2.8e-32 | 2 | 137 | 227 | 374 |
GRAS 227 vLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerr 306 +L+lvk+l+Pkvvv ++q + f++ ++ ++l+ds++a+ ++ ++ +k+Er+l++++i+n+v ++ + evm.model.AsparagusV1_04.3526 2 ILRLVKQLNPKVVVSADQGYNQ-------NFIHLFHPLVVLLDSIDAS-GSGADIVNKIERFLIQPRIENAVLAQYRT-- 71 79***************99887.......699***************9.8999999********************99.. PP GRAS 307 erhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + + Wre + ++GF + ++s+++++qa++ll++v+++g++ve+++gs++l+W++ +L svSaW+ evm.model.AsparagusV1_04.3526 72 --AAKIAPWREIFASVGFVQGQFSNFTETQAECLLKRVQVRGFQVEKRQGSMFLYWQRGELGSVSAWK 137 ..8999*************************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 139 aa Download sequence |
MILRLVKQLN PKVVVSADQG YNQNFIHLFH PLVVLLDSID ASGSGADIVN KIERFLIQPR 60 IENAVLAQYR TAAKIAPWRE IFASVGFVQG QFSNFTETQA ECLLKRVQVR GFQVEKRQGS 120 MFLYWQRGEL GSVSAWKC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G00150.1 | 2e-38 | GRAS family protein |