PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_04.3173 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | WRKY | ||||||||
Protein Properties | Length: 194aa MW: 22483.5 Da PI: 8.4872 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 101.3 | 5.8e-32 | 120 | 178 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vk+s +prsY+rCt+++C+vkkkver +ed ++v++tYeg+H+h+ evm.model.AsparagusV1_04.3173 120 LDDGYKWRKYGQKTVKNSLHPRSYFRCTHHNCRVKKKVERLSEDCRMVITTYEGRHTHT 178 59********************************************************7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 194 aa Download sequence |
MFSGSMLIKI IFVSHLVDIS MEGGESRLAS HCYVLEIPPV SNLTNLQQEE SLQGLIQGPN 60 CNPNFKPWSN EELETSDPKD VSNSWWKRSS LGVEKGKMRM RRKMREPRFC FQTRSDVDVL 120 DDGYKWRKYG QKTVKNSLHP RSYFRCTHHN CRVKKKVERL SEDCRMVITT YEGRHTHTPD 180 DTNSSEPECF SSF* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 99 | 105 | RMRRKMR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G44745.1 | 3e-54 | WRKY family protein |