PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.3098
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 752aa    MW: 82052.7 Da    PI: 6.1332
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.3098genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox66.92.7e-2188142256
                                    T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                       Homeobox   2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                                    ++ +++t++q++eLe+lF+++++p++++r eL+k+l+L+ rqVk+WFqNrR+++k
  evm.model.AsparagusV1_04.3098  88 KRYHRHTPQQIQELEALFKESPHPDEKQRMELSKRLNLEPRQVKFWFQNRRTQMK 142
                                    678899**********************************************999 PP
2START184.46.2e-582775031205
                                    HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGC CS
                          START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeq 71 
                                    ela++a++elvk+++ +ep+W +      e +n++e+lq f++  +     + +ea r++g+v+ ++  lve+l+d + +
  evm.model.AsparagusV1_04.3098 277 ELALAAMDELVKMVQMGEPLWIQGFengkEALNYEEYLQVFPRCIGakpveFVSEATRETGMVIINSLALVEILMDAN-R 355
                                    5899*******************9999999***********9998899******************************.* PP

                                    T-TT-S....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--... CS
                          START  72 Wdetla....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe.. 138
                                    W  +++     a t++ i+sg      ga+qlm+aelq+lsplvp Rd+ f+R+++ql +g w++vdvS+d     ++  
  evm.model.AsparagusV1_04.3098 356 WADMFPgmiaNAVTTDIICSGvggtrnGAIQLMNAELQVLSPLVPtRDVSFLRFCKQLAEGAWAVVDVSIDGGGRESSlv 435
                                    ******999999***********************************************************988888779 PP

                                    .-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
                          START 139 .sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                                       s++++++lpSg+++++++ng+skvtwveh++++++ +h+l+r+l++sg+a ga +wvatlqr  e
  evm.model.AsparagusV1_04.3098 436 vAGSSMKCRRLPSGCVVQDMPNGYSKVTWVEHAEYDDAAVHQLYRPLLRSGMALGAHRWVATLQRRSE 503
                                    999*************************************************************9766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 752 aa     Download sequence    
MPVGSVISQS RFISPSVLQK PMFNSPGLSL GLQSNDLDGK GDELSRIMED LDSARDEERE  60
SRSGSDHLDF ASGDDLELEN PRKRKKQKRY HRHTPQQIQE LEALFKESPH PDEKQRMELS  120
KRLNLEPRQV KFWFQNRRTQ MKTQIERHEN ALLKQENEKL RLENITIRDA MRSPMCGGCG  180
GPAILGELSL EEQQLRIENA RLKDELDRVC ALAGKFLGKP VTGFSTFSPA MPNSSLDLGF  240
NGFYSMAPNL PQVSDFVASS STGTVIDRSL EKSVLLELAL AAMDELVKMV QMGEPLWIQG  300
FENGKEALNY EEYLQVFPRC IGAKPVEFVS EATRETGMVI INSLALVEIL MDANRWADMF  360
PGMIANAVTT DIICSGVGGT RNGAIQLMNA ELQVLSPLVP TRDVSFLRFC KQLAEGAWAV  420
VDVSIDGGGR ESSLVVAGSS MKCRRLPSGC VVQDMPNGYS KVTWVEHAEY DDAAVHQLYR  480
PLLRSGMALG AHRWVATLQR RSECLAILLS SSIPNDNSAI TPAGRRSMLK LAQRMMDNFC  540
AGVCASSSRK WRRFVSVGDN NIADDVRVMT RQSLNEPGEP PGVVLSAATS VWVPVPERLR  600
SQWDILSNGG PMQEMAHIAK GQHQGNAVSL LRASAATGGT QGNSMLILQE TCTDSSGSMV  660
VYAPVDVPAM HLVMNGGDSA YVALLPSGFS IVPDGAHNKA GTSGGSLLTV AFQILVNTLP  720
SAKLTAESVE TVNNLISCTV QKIKVSLSAE N*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18188PRKRKKQK
28286RKRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61150.10.0HD-ZIP family protein