PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.2873 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | FAR1 | ||||||||
Protein Properties | Length: 198aa MW: 22862.1 Da PI: 10.0865 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 67 | 4.9e-21 | 35 | 123 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +fYn+YA++ GFs+r+++ ++g t+r f C keg r+ +k++ + r++r etrt+ + +k+ + ++k+ ++ evm.model.AsparagusV1_04.2873 35 DFYNKYARSEGFSIRRTAYAAD-KQGVLTSRIFICCKEGLRKADKRD-NLMRNPRGETRTNYGVIMGIKLVRrTSKYSIY 112 6***************987766.8899*****************999.9*********************999******* PP FAR1 80 kleleHnHela 90 ++++eHnH+l evm.model.AsparagusV1_04.2873 113 RFSKEHNHPLI 123 *********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 198 aa Download sequence |
MEEPMKENNN SLERSKEDLK PKFFMEFDSE IDAYDFYNKY ARSEGFSIRR TAYAADKQGV 60 LTSRIFICCK EGLRKADKRD NLMRNPRGET RTNYGVIMGI KLVRRTSKYS IYRFSKEHNH 120 PLISQESVHL MPSHRKITSS DEAFLDLTAN SSLSPKSAFE LMGQQVGGRE SLGFTKVDQK 180 NYLRAVRQKK NLEKLVI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 2e-27 | FAR1 family protein |