PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.2652
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 294aa    MW: 33307.1 Da    PI: 7.6855
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.2652genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM159.71.1e-49181432128
                            NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 
                                    +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sg
  evm.model.AsparagusV1_04.2652  18 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSG 96 
                                    79***************************.89***************8778899************************** PP

                            NAM  82 yWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                    yWkatg d+ +  ++++++glkktLvfy+g+apkg +++W+m+eyrl
  evm.model.AsparagusV1_04.2652  97 YWKATGADRMIRGEDSRQIGLKKTLVFYSGKAPKGIRSSWIMNEYRL 143
                                    *********************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MAIEENMSRD DHEHDLVMPG FRFHPTEEEL IEFYLRRKVE GKRFNVELIT FLDLYRYDPW  60
ELPALAAIGE KEWFFYVPRD RKYRNGDRPN RVTTSGYWKA TGADRMIRGE DSRQIGLKKT  120
LVFYSGKAPK GIRSSWIMNE YRLPQADTDR YQKAEISLCR VYKRAGGDDH YNLPSTLSSK  180
TASSRQSRPN TVNQPKPACA AFPGDSSSSN SQSSAEKLQK GVSSGSDQHA LLHVPTTASL  240
VEGEDATTAG VADGFTSLLP FPSQPQQHPF SMLEYWNYLQ QPDAGRDFTS NFK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.11e-107NAC family protein