PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.2096 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 243aa MW: 27407 Da PI: 8.4914 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.4 | 1.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l +++q+G g+W++ ++ g+ R++k+c++rw +yl evm.model.AsparagusV1_04.2096 14 KGAWTKEEDERLSAYIRQHGEGCWRSLPKAAGLLRCGKSCRLRWINYL 61 79******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 59.3 | 8.7e-19 | 67 | 110 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eEdel+++++ +lG++ W++Ia +++ gRt++++k++w++ evm.model.AsparagusV1_04.2096 67 RGNFTEEEDELIIKLHSLLGNK-WSSIAGELP-GRTDNEIKNYWNT 110 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence |
MGRSPCCEKA HTNKGAWTKE EDERLSAYIR QHGEGCWRSL PKAAGLLRCG KSCRLRWINY 60 LRPDLKRGNF TEEEDELIIK LHSLLGNKWS SIAGELPGRT DNEIKNYWNT RIKRKLLSQG 120 IDPASHRPLR APVSDVTISF TKNREDKQNL DFISQEKERS SNSSRSSSNS NDSTPTQCLD 180 LNLELCISPP AVEQTEGVSV KREVFCFDCR LGLRESNGCI KCEGFFGLSS AGVLDFRSFQ 240 MK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38620.1 | 2e-92 | MYB family protein |