PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1803
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 218aa    MW: 24793.2 Da    PI: 5.7967
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1803genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH345.4e-1166113454
                                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    ++  rE+ RRd+iN++f+eL ++l +    +  K +K++iL  A + +++L
  evm.model.AsparagusV1_04.1803  66 SKACREKMRRDKINERFSELSKILDPG---RPVKTDKSAILDDALRILNQL 113
                                    6789**********************8...89*************999998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MDLVQDGELD LDYYARIMED AQSIDFYLND SPSPGAEFDS SIANISTQAN GTRKRDRDEQ  60
TVKQGSKACR EKMRRDKINE RFSELSKILD PGRPVKTDKS AILDDALRIL NQLKAEAKDL  120
KEANRKLEEE IKSLKEEKHE LREEKSLMKS EKEKMEEHVK AMSMVPAGYV PPLPAAYHPG  180
ANKMVAFPSY GPFPMWQWMP PAARDISKDH ELRPPMA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14410.21e-43bHLH family protein