PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1797 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 148aa MW: 16338.7 Da PI: 10.4344 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.6 | 3.7e-19 | 27 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd + ng r++lg+f++ae+Aa a+++a+ + +g evm.model.AsparagusV1_04.1797 27 CYRGVRRRP-WGKYAAEIRDSTRNG--VRVWLGTFDSAEDAALAYDQAAFSTRG 77 8********.**********44465..**********************99887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence |
MHRTQTTPAG CKSDVSRSQH NKKKDKCYRG VRRRPWGKYA AEIRDSTRNG VRVWLGTFDS 60 AEDAALAYDQ AAFSTRGATA VMNFPLEEVR ESLRGLGYCK MEDDGSPVIG LKKRYSMKRK 120 AVGVRKGKGI EKREVKVECS GVGGFGC* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31230.1 | 7e-36 | ERF family protein |