PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1746
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family ARR-B
Protein Properties Length: 550aa    MW: 61780.7 Da    PI: 6.5551
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1746genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.33.6e-28321375156
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                                    k++++Wtp+LH+rFv+aveqL G+++A+P++ilelmkv+gLt+++++SHLQkYR++
  evm.model.AsparagusV1_04.1746 321 KTKVDWTPDLHRRFVQAVEQL-GIDQAIPSKILELMKVEGLTRHNIASHLQKYRMH 375
                                    6799*****************.********************************96 PP
2Myb_DNA-binding42.81.2e-13324373248
                                    SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                      WT++++ ++v+av+qlG +   +++I + m  +g+t+ ++ s++qky+
  evm.model.AsparagusV1_04.1746 324 VDWTPDLHRRFVQAVEQLGIDqaIPSKILELMKvEGLTRHNIASHLQKYR 373
                                    57***********************************************7 PP
3Response_reg326.5e-12201261109
                                    EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH..HHHHESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEE CS
                   Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealell..kekdpDlillDiempgmdGlellkeireeepklpiivvt 78 
                                    vl+ d++ + +   +  le  +y +v + ++  eale +  k++ +++ ++ +  ++++G+  + e+++   +lp+i+++
  evm.model.AsparagusV1_04.1746  20 VLLLDEDATSAAQTKLKLEAMDY-IVCSYRNENEALEAIsmKAESFHVAIVEVTSSNSQGSFKFIEMAK---DLPVIAIS 95 
                                    7889999999999999999****.***************555555***************855555544...89****** PP

                                    STTTHHHHHHHHHTTESEEEESS--HHHHHH CS
                   Response_reg  79 ahgeeedalealkaGakdflsKpfdpeelvk 109
                                    +    +++ +++++Ga +fl Kp ++e+l++
  evm.model.AsparagusV1_04.1746  96 DVRCLSTMMKCISLGAAEFLQKPLSEEKLRN 126
                                    ****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    
MGCSAEDLVA WRDFPKGLRV LLLDEDATSA AQTKLKLEAM DYIVCSYRNE NEALEAISMK  60
AESFHVAIVE VTSSNSQGSF KFIEMAKDLP VIAISDVRCL STMMKCISLG AAEFLQKPLS  120
EEKLRNIWQH VVHKAFNAGG NDISKSLEPI KDTVVSMLQL QSNTERETSE KDQETKQDSS  180
EESDRFQAPS TPQLVTGGKD DEYFQDPVTH TKDNLDNSTD LIEVRKYSHS KSKPVDITTS  240
SLPNLDSSRE DEMISRHIEE EVTSDNGSKT DECSSIKDSC EPSLHMNKGG NMESSVEEHK  300
KKKSFLRSSS TSHSNKGDRR KTKVDWTPDL HRRFVQAVEQ LGIDQAIPSK ILELMKVEGL  360
TRHNIASHLQ KYRMHKRHIL PKDDARWKLH RDSIPRGYMQ KPVVVIPPFH SSYGLPSSQV  420
YPFWGHPNYY TPGFPSWHPP QGNWLWKARP GVHADAWGCP VVPPYSQFSM PPQNTTLCNG  480
WDASGGRNSV SKDSCDFNLA DEVIDEVVKE AMSKPWLPLP LGLKPPSLDS VLNELQRQGI  540
RTIPPIPRS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18020.31e-122ARR-B family protein