PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1698 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 220aa MW: 24478.1 Da PI: 8.4872 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.7 | 6.5e-11 | 2 | 50 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h ++Er+RR+ +N+ ++ Lr+l+P++ + ++ + a+++ A++++k+L+ evm.model.AsparagusV1_04.1698 2 THIAVERNRRRLMNEHLAVLRSLMPES---YIQRGDQASVVGGAIDFVKELE 50 8**************************...9******************995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 220 aa Download sequence |
MTHIAVERNR RRLMNEHLAV LRSLMPESYI QRGDQASVVG GAIDFVKELE QHLQSLEVQK 60 RTLQQQKRTK AEESLSRAAE PVTSTKNRDE NEQAPFGQFF AYPQYTWCHS PSEYPPPMPD 120 TPSAADTLKV TVMKSRMTNL RILTPRPRQL LKMVAGLQAL RLSVLHLNVT TLDSMVLYSI 180 SVKVEEGCSL TTVDDIAAAV HHISGTVSVA DAFCKGPVH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72210.1 | 1e-59 | bHLH family protein |