PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1653 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 164aa MW: 17605 Da PI: 9.8234 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 43.8 | 5e-14 | 85 | 118 | 1 | 33 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T-- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCp 33 ldDg++WrK qK vkg+++prsYY+Ct+ Cp evm.model.AsparagusV1_04.1653 85 LDDGCRWRKCRQKAVKGNPNPRSYYKCTTVaFCP 118 59**************************975675 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MVGNVSPPAR SPQGAGRLQR GASTSRGPRR HGQGVRDYAI VISHNPDNGT SSKNEGENEG 60 ISVIGNQTVR EPRVVVQTTS DIDILDDGCR WRKCRQKAVK GNPNPRSYYK CTTVAFCPHY 120 PIGCQQLPFA HIIPLAPQAG SLLKLATGLV FYIAGNGVFC SLF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38470.1 | 2e-24 | WRKY family protein |