PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1557
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 250aa    MW: 27089.9 Da    PI: 8.4843
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1557genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.6e-1262104754
                                    HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                                    ++ErrRR+++N+++  Lr+++Pk +      K++ a+iL  A+eY+k+L
  evm.model.AsparagusV1_04.1557  62 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 104
                                    79*********************66......****************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MTAALTRSGL NYDSDDFAPD NNSAGRKLDE SDGKNGSEGK VTGGGGEREG KIEGVLPAKN  60
LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQRIND LHNELESTPS  120
SSALPTPTGS SFHPLTPTLP TLPSRVKEEL CPSSLPSPTG QQARVEVRVR EGRAVNIHMF  180
CARRPGLLLS TMRALDGLGL DIQQAVISCF NGFALDVFRA EQLKDGPGVM PEEIKAVLLH  240
SAGLQNAMQ*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16471ERRRRKKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26744.19e-82bHLH family protein