PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1557 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 250aa MW: 27089.9 Da PI: 8.4843 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.4 | 4.6e-12 | 62 | 104 | 7 | 54 |
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 ++ErrRR+++N+++ Lr+++Pk + K++ a+iL A+eY+k+L evm.model.AsparagusV1_04.1557 62 MAERRRRKKLNDRLYMLRSVVPKiS------KMDRASILGDAIEYLKEL 104 79*********************66......****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MTAALTRSGL NYDSDDFAPD NNSAGRKLDE SDGKNGSEGK VTGGGGEREG KIEGVLPAKN 60 LMAERRRRKK LNDRLYMLRS VVPKISKMDR ASILGDAIEY LKELLQRIND LHNELESTPS 120 SSALPTPTGS SFHPLTPTLP TLPSRVKEEL CPSSLPSPTG QQARVEVRVR EGRAVNIHMF 180 CARRPGLLLS TMRALDGLGL DIQQAVISCF NGFALDVFRA EQLKDGPGVM PEEIKAVLLH 240 SAGLQNAMQ* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 64 | 71 | ERRRRKKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G26744.1 | 9e-82 | bHLH family protein |