PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.147

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

NAC

Protein Properties

Length: 424aa MW: 48399.7 Da PI: 5.1178

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.147	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	117.3	1.5e-36	27	163	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksg 81 lp+Gf+F+Ptdeel+++yL++kv g +l++e +i +++iy+++P +L ++++ +ek+wyfF++r++ky++g+r+ ra++ g evm.model.AsparagusV1_04.147 27 LPVGFKFRPTDEELIQDYLRPKVLGGELPCEGIIVDTNIYHHDPTQLAETYADHEKSWYFFTPRNRKYEKGSRPDRAASGG 107 79**************************999**********988888899********************* PP NAM 82 yWkatgkdkevlsk...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 +Wkat d ++ +k ++ + g k+ L f+ + +g+kt+W+m ey++ evm.model.AsparagusV1_04.147 108 FWKATAADIAIEKKegdRKIKLGDKTALGFWetkksrVRSIDRGTKTEWLMYEYKI 163 ********9977666779*****44433213446799*******97 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MANQEDRFLS PLAISFDGEE EREPERLPVG FKFRPTDEEL IQDYLRPKVL GGELPCEGII 60 VDTNIYHHDP TQLAETYADH EKSWYFFTPR NRKYEKGSRP DRAASGGFWK ATAADIAIEK 120 KEGDRKIKLG DKTALGFWET KKSRVRSIDR GTKTEWLMYE YKIEESKQPI KNGHMLLDDY 180 VLSKIYRSCR KGWKKAAPVA VNPDNLQEQI QQPNKRARHQ PEPERKPEPN FDPTQIQPVP 240 DNLFLPNPET VQDENAYMFQ NQSLQTALWN PNQPPDPLDH NFASSSDDNF FPDLPDFDFP 300 LDFDQHEPAN YQSNSPLPQG YNGESSIQPG MANFNVGVHG QDFQQLQINN YGVANFNIGV 360 HGQNSQQLQY NYGDIHSPAQ FLATQNSEAI ENGPQKFTGP IRLNLQKVAE AALNNNKTRT 420 VVY*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MANQEDRFLS PLAISFDGEE EREPERLPVG FKFRPTDEEL IQDYLRPKVL GGELPCEGII  60
VDTNIYHHDP TQLAETYADH EKSWYFFTPR NRKYEKGSRP DRAASGGFWK ATAADIAIEK  120
KEGDRKIKLG DKTALGFWET KKSRVRSIDR GTKTEWLMYE YKIEESKQPI KNGHMLLDDY  180
VLSKIYRSCR KGWKKAAPVA VNPDNLQEQI QQPNKRARHQ PEPERKPEPN FDPTQIQPVP  240
DNLFLPNPET VQDENAYMFQ NQSLQTALWN PNQPPDPLDH NFASSSDDNF FPDLPDFDFP  300
LDFDQHEPAN YQSNSPLPQG YNGESSIQPG MANFNVGVHG QDFQQLQINN YGVANFNIGV  360
HGQNSQQLQY NYGDIHSPAQ FLATQNSEAI ENGPQKFTGP IRLNLQKVAE AALNNNKTRT  420
VVY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04070.2	2e-37	NAC family protein