PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1442
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 311aa    MW: 35248.3 Da    PI: 8.6516
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1442genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.42.8e-32143196255
                        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  evm.model.AsparagusV1_04.1442 143 PRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 196
                                    9****************************************************7 PP
2Myb_DNA-binding491.4e-15144195148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWTt ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+y+
  evm.model.AsparagusV1_04.1442 144 RMRWTTTLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 195
                                    89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MELFPAQPDL SLQISPPNSR STSDEPMDLG FWSNKNLSNN GSNSASTSTV DLSLANPSPL  60
HPLQNLQQYY KRHDIGPMRP IRGIPIYHGP PPHHHHHQTS SFPFTQQYHQ PQHYHQQYHQ  120
CESLVQRSRF LTRFPAKRSM RAPRMRWTTT LHARFVHAVE LLGGHERATP KSVLELMDVK  180
DLTLAHVKSH LQMYRTVKTT DRPPNSSDQN EPIEISDDNL HDIRGPEPMQ NGKPSGQSGD  240
NYYGLWSNSS SKGNWFHDKT IESSPGSLPT FENGMRYSKS MELISDMNSS CVSEPSAKKP  300
NLEFTLGRPH *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32240.11e-52G2-like family protein