PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1379

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Nin-like

Protein Properties

Length: 923aa MW: 103443 Da PI: 6.0323

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1379	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	90.3	1.5e-28	600	650	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l++yF++++kdAAk++gvc+T+LKriCRq+GI RWP+Rkik++ evm.model.AsparagusV1_04.1379 600 EKTVSLQVLRQYFAGSLKDAAKSIGVCPTTLKRICRQHGITRWPSRKIKKV 650 799**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 923 aa Download sequence
MNLNSAMEDS GARKTECSPE RSLSDSAVDF DLMDEILSGD CWLQTPDYSD LFQPSGSAPS 60 PFFPLLDISN HGSNAILAET DNREETPPNS SSEQGLNLLV QPRSPTPPLK DRLIHALKCI 120 KESQRDCDVL VQIWVPIRRG GRHFLSTSGQ PFWLDAENQG LDSYREVSTS YRFSAEENSN 180 EAVGLPSRVF LGRVPEWTPD VRYFSSYEYP RVDHAQRYNV CGTIALPVFE RDSRSCLGVL 240 EVVLTRQKIN YSSDLESICS ALQAVDLRSY DVLSVPRVKV SNNSYQAALP EIQQVLKVVC 300 ETHNLPLAQT WITCIQQDKQ GCRHSNENYK ECVSTVDVAC YVNDPSMLSF HEACSEHHLF 360 RGQGVAGKAF TTNQPCFSPD VTSFTKTEYP LSHHAKLFNL RGTVAIRLRS FHTGKADFVL 420 EFFLPVNCIE SEEQRLMLNS LSTTIQQVCQ SLRVVTAKEL EDEAMLEVDE SYPSDFLFDE 480 SFSEGGQGID ERNVFSSGSP STGISIEVPS LIVNVTEVQE KEEHGLLPSS THLEFRKQDI 540 EELKVTNNWN TSESGLSKSR IFYESEQLPQ STADEKDNVC SDITLPQARK TTEKRRAKTE 600 KTVSLQVLRQ YFAGSLKDAA KSIGVCPTTL KRICRQHGIT RWPSRKIKKV GRSLKKLQVV 660 IDSVQGAEGT FQFSSVYENF AKISSPNKEL LEKQTDHPGS SNTLQQLEGR FSSHTSASNS 720 LSSASCSQSS SSSLGCSSGS KQLIHTSQPA IKHEVPTEEN KIENSEVELW SSSREPPRPL 780 VRSQSHHAFV HHPTLENSSL LTKRSQSHRA LAEHPSLENP SQLQKRSEVY KIKAIYREEK 840 VRFRLQPDWG FRELKQETVK RFHITDVNSV DIKYLDDDSE WVLLTCDADL QECIDVYKSS 900 NSGVIKMSVH HVASAVVTVN LC*

Sequence ? help Back to Top

Protein Sequence Length: 923 aa Download sequence

MNLNSAMEDS GARKTECSPE RSLSDSAVDF DLMDEILSGD CWLQTPDYSD LFQPSGSAPS  60
PFFPLLDISN HGSNAILAET DNREETPPNS SSEQGLNLLV QPRSPTPPLK DRLIHALKCI  120
KESQRDCDVL VQIWVPIRRG GRHFLSTSGQ PFWLDAENQG LDSYREVSTS YRFSAEENSN  180
EAVGLPSRVF LGRVPEWTPD VRYFSSYEYP RVDHAQRYNV CGTIALPVFE RDSRSCLGVL  240
EVVLTRQKIN YSSDLESICS ALQAVDLRSY DVLSVPRVKV SNNSYQAALP EIQQVLKVVC  300
ETHNLPLAQT WITCIQQDKQ GCRHSNENYK ECVSTVDVAC YVNDPSMLSF HEACSEHHLF  360
RGQGVAGKAF TTNQPCFSPD VTSFTKTEYP LSHHAKLFNL RGTVAIRLRS FHTGKADFVL  420
EFFLPVNCIE SEEQRLMLNS LSTTIQQVCQ SLRVVTAKEL EDEAMLEVDE SYPSDFLFDE  480
SFSEGGQGID ERNVFSSGSP STGISIEVPS LIVNVTEVQE KEEHGLLPSS THLEFRKQDI  540
EELKVTNNWN TSESGLSKSR IFYESEQLPQ STADEKDNVC SDITLPQARK TTEKRRAKTE  600
KTVSLQVLRQ YFAGSLKDAA KSIGVCPTTL KRICRQHGIT RWPSRKIKKV GRSLKKLQVV  660
IDSVQGAEGT FQFSSVYENF AKISSPNKEL LEKQTDHPGS SNTLQQLEGR FSSHTSASNS  720
LSSASCSQSS SSSLGCSSGS KQLIHTSQPA IKHEVPTEEN KIENSEVELW SSSREPPRPL  780
VRSQSHHAFV HHPTLENSSL LTKRSQSHRA LAEHPSLENP SQLQKRSEVY KIKAIYREEK  840
VRFRLQPDWG FRELKQETVK RFHITDVNSV DIKYLDDDSE WVLLTCDADL QECIDVYKSS  900
NSGVIKMSVH HVASAVVTVN LC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76350.1	0.0	Nin-like family protein