PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1294 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 892aa MW: 98670.8 Da PI: 8.2669 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 84.8 | 6.7e-27 | 78 | 160 | 2 | 71 |
E2F_TDP 2 keksLrlltqkflklleksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkek 64 ++++Lr++++k ++ek+e+ g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k evm.model.AsparagusV1_04.1294 78 SGRGLRQFSMK---VCEKVESkGRTTYNEVADELVAEfadpgnnigppdqqqyDEKNIRRRVYDALNVLMAMDIISK-DK 153 689********...*****999*******************************************************.** PP E2F_TDP 65 neirwkg 71 +ei+w+g evm.model.AsparagusV1_04.1294 154 KEIQWRG 160 *****98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 892 aa Download sequence |
MTATRAPPTR RSSGRRGGLR RSPAASXXXX ATPASDSTFI RMNQLDIHGD DAGSSQAAAE 60 EGNKKKKRGT RAVAGDKSGR GLRQFSMKVC EKVESKGRTT YNEVADELVA EFADPGNNIG 120 PPDQQQYDEK NIRRRVYDAL NVLMAMDIIS KDKKEIQWRG LPRTSLNDVE ELKAERVALK 180 SRIDKKAAYL QELEDQYIGL QNLVNRNEQL HGDNPPGGVA LPFILVQTRP HATIEVEISE 240 DMQLVHFDFN STPFELHDDS YVLRAMRLSE QEHNDGDHEP HSIICDSSST QGLFSPPRPL 300 IRPNSQGKKS RSVRRGAYER RAGVGADGDE PCESTGRARD AWSTGCGVAL DAATRGLRVG 360 LVEREDFSSG TSSRSTKLIH GGVRYLEKAV FNLDYGQLKL VFHALKERKQ VIENAPHLCQ 420 ALPCMTPCFE WFEVLYYWAG LKMYDLVAGR RMLHLSRYYS ADESIELFPT LARKGHDRSL 480 KGTVVYYDGQ MNDSRLNVGL ACTAALVGAA VLNHAEVISI IKDDAGDRII GARIRDKISG 540 KEFDTFARVV VNAAGPFCDA VRKMADKDAP PMISPSSGVH IVLPDYYSPE GMGLIVPKTK 600 DGRVVFMLPW LGRTIAGTTD SNTPITMLPE PHEDEIQFIL DAICDYLNVQ VRRGDVLSAW 660 SGIRPLAIDP SAKNTESISR DHVVCEDYPG LVTITGGKWT TYRSMAEDAV NAAVRSGKLK 720 PANGCVTNNL HIVGGNGWDP ASFTVLAQQY VRMKKSYGGK IIPGVMDSYI SKHLSHAYGT 780 MAERVATIAQ NENLGKRLAH GYPFLEAEVA YCARNEYCES AVDFVARRCR LAFLDTDAAG 840 RALPRIIEIL ASEHKWDKAR KKLEFQKAKQ FLETFKSSKN AQFHDGKHTG S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03415.1 | 1e-125 | E2F/DP family protein |