PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_04.1238
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family E2F/DP
Protein Properties Length: 839aa    MW: 92725.4 Da    PI: 6.632
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_04.1238genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP77.11.6e-2485150171
                        E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                                    r+++sL llt+kf++ll+++e+g+++ln +a+ L   +v  ++RRiYDi+NVLe+++l+ek+ kn+i+wkg
  evm.model.AsparagusV1_04.1238  85 RYDSSLSLLTKKFVNLLQRQEDGTLDLNRAAELL---EV--QKRRIYDITNVLEGVGLMEKNLKNRISWKG 150
                                    6899******************************...99..****************************98 PP

Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MSGVDGSHLR LQRRPVATPP ATQILRPVHN DALLPDAPTA AARPASTRAF RLDPCCLIPT  60
SPRNRSGDIK AKGKGVPDPL GSSCRYDSSL SLLTKKFVNL LQRQEDGTLD LNRAAELLEV  120
QKRRIYDITN VLEGVGLMEK NLKNRISWKG DEVFGSMELD NQIAELKAAN ESLFKEECRI  180
DKMIREMEEN LRVLKERDLK YLYLTKEDIN SLPCFQNSTL MAIKAPHGTS IEVPDPDEGL  240
GFSQRRYQVF LRTSMGPINC FLISSNEEKP QASNEGHQLV PMDCSFDNNH NNRDEGPTMH  300
PSDQATATTS APMQEADTQK ISSDPLIYDE QVGGIVKIVP PDVNVDADYW FETDQQGSLT  360
DMWNECCALG LWYKDVEDNV PSPPPQPSVP QPHDPPSQSS VSQSHALGDT HAQVGYGGEN  420
RIATHAHVSI SGQVIKSKKE NDNKKKEAKS CTFKVYGNIQ LTAAQQQSGS FIMGPSVIAR  480
GWFSGRGFLG KETMYMSATE STAHDEKISV LSSIGSRVQS FNLEAQSNVD GRSEDRLVLG  540
YAYPAYECFK TVELNKPEIE QLRFWCQYWI LVAALTVFER VGESFISWLP MYSEAKVAFF  600
VYLWYPKTRG TAYVYETFFR PYVSKHETEI DRNLLELRTR AGDMVVLYSQ RIASYGQTRF  660
FEILQYVASQ SPSQSTRPRP AQQRQEPLQQ SQQVRPTAPT TATRQPAVSQ QPQHLTRQPP  720
PPASPSKSPL QEPTKIAASS SAVTVPPAAQ SQSLAKTASL PSSSGQPPSL GKAASLPSSL  780
DTVSSASSPD DADKMQVEVA SAILDNKQNP PPPQETPMEE AIRVTRGRLR KRAAAGGS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22220.22e-80E2F/DP family protein