PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1238 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | E2F/DP | ||||||||
Protein Properties | Length: 839aa MW: 92725.4 Da PI: 6.632 | ||||||||
Description | E2F/DP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | E2F_TDP | 77.1 | 1.6e-24 | 85 | 150 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL llt+kf++ll+++e+g+++ln +a+ L +v ++RRiYDi+NVLe+++l+ek+ kn+i+wkg evm.model.AsparagusV1_04.1238 85 RYDSSLSLLTKKFVNLLQRQEDGTLDLNRAAELL---EV--QKRRIYDITNVLEGVGLMEKNLKNRISWKG 150 6899******************************...99..****************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 839 aa Download sequence |
MSGVDGSHLR LQRRPVATPP ATQILRPVHN DALLPDAPTA AARPASTRAF RLDPCCLIPT 60 SPRNRSGDIK AKGKGVPDPL GSSCRYDSSL SLLTKKFVNL LQRQEDGTLD LNRAAELLEV 120 QKRRIYDITN VLEGVGLMEK NLKNRISWKG DEVFGSMELD NQIAELKAAN ESLFKEECRI 180 DKMIREMEEN LRVLKERDLK YLYLTKEDIN SLPCFQNSTL MAIKAPHGTS IEVPDPDEGL 240 GFSQRRYQVF LRTSMGPINC FLISSNEEKP QASNEGHQLV PMDCSFDNNH NNRDEGPTMH 300 PSDQATATTS APMQEADTQK ISSDPLIYDE QVGGIVKIVP PDVNVDADYW FETDQQGSLT 360 DMWNECCALG LWYKDVEDNV PSPPPQPSVP QPHDPPSQSS VSQSHALGDT HAQVGYGGEN 420 RIATHAHVSI SGQVIKSKKE NDNKKKEAKS CTFKVYGNIQ LTAAQQQSGS FIMGPSVIAR 480 GWFSGRGFLG KETMYMSATE STAHDEKISV LSSIGSRVQS FNLEAQSNVD GRSEDRLVLG 540 YAYPAYECFK TVELNKPEIE QLRFWCQYWI LVAALTVFER VGESFISWLP MYSEAKVAFF 600 VYLWYPKTRG TAYVYETFFR PYVSKHETEI DRNLLELRTR AGDMVVLYSQ RIASYGQTRF 660 FEILQYVASQ SPSQSTRPRP AQQRQEPLQQ SQQVRPTAPT TATRQPAVSQ QPQHLTRQPP 720 PPASPSKSPL QEPTKIAASS SAVTVPPAAQ SQSLAKTASL PSSSGQPPSL GKAASLPSSL 780 DTVSSASSPD DADKMQVEVA SAILDNKQNP PPPQETPMEE AIRVTRGRLR KRAAAGGS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22220.2 | 2e-80 | E2F/DP family protein |