PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_04.1195 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 299aa MW: 33599.4 Da PI: 4.6598 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56 | 9.2e-18 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd +l+ +++++G g+W++ +r g+ R++k+c++rw +yl evm.model.AsparagusV1_04.1195 16 KGSWTPEEDMRLITYIHKYGHGNWRALPRLAGLLRCGKSCRLRWINYL 63 799*****************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3e-16 | 69 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +++++ lG++ W++Ia++++ gRt++++k+ w+++l evm.model.AsparagusV1_04.1195 69 RGNFTEEEEDTIIKLHGVLGNK-WSKIASCLP-GRTDNEIKNVWNTHL 114 89********************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 299 aa Download sequence |
MGRGRAPCCA KVGLNKGSWT PEEDMRLITY IHKYGHGNWR ALPRLAGLLR CGKSCRLRWI 60 NYLRPDIKRG NFTEEEEDTI IKLHGVLGNK WSKIASCLPG RTDNEIKNVW NTHLKKRLTP 120 KDRKSQQKLE EDPSSPSSVT TASVSCSDEG SSKTDKERAE TTVEANNESI EMRDQETSKV 180 EIPVEPNLDF WDVFQDCSVS DVGLKDEYSL ADLPEIMIEP EILNMINDDL DVAANTAAAA 240 NDHRDHQDAE KESENWLAYL EKELDLWGES TATTNADVEG ADPVASYFQA LQELHLHL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56160.1 | 1e-68 | MYB family protein |