PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1169

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

STAT

Protein Properties

Length: 660aa MW: 73856.7 Da PI: 7.3098

Description

STAT family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1169	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	STAT	178.8	8.1e-56	176	294	1	118
STAT 1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcd 79 ldvvll+alg++v+k++e+ asL+yad+ ++vek+ dd+e+pLL+s+dG+ef+++d+p+ llrGra fklkisqLssk+d evm.model.AsparagusV1_04.1169 176 LDVVLLDALGRSVHKEMEIFASLVYADNRAPVEKTrDDKEDPLLTSCDGLEFPTVDKPVILLRGRAIFKLKISQLSSKSD 255 8********************************99*************************************** PP STAT 80 nrLfrikfeipklkkypfleavskpirCisrsrntrsss 118 nrLf ++f+ +kypflea+s+pirCisr+r+ r+s evm.model.AsparagusV1_04.1169 256 NRLFLVRFNATGSQKYPFLEAYSRPIRCISRNRSFRPSV 294 ********************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 660 aa Download sequence
MTSERDCKVP FLALNEENKL SLFPLMFLHT DTKAQSPDSS SVWMNIPHIC TDIDCAREKW 60 VHVGCEVAAN RMRLHVNGTL VREKALSVLS KDQNYQDNVK KIALVGNNGD VEKLHAYVYD 120 LRLLPISTST KDHFIKNPPV KLTLDDSCIA DGIEEGSDGV WSIVGGKASC RRNFSLDVVL 180 LDALGRSVHK EMEIFASLVY ADNRAPVEKT RDDKEDPLLT SCDGLEFPTV DKPVILLRGR 240 AIFKLKISQL SSKSDNRLFL VRFNATGSQK YPFLEAYSRP IRCISRNRSF RPSVVGRRPF 300 SGSTLPDGTH SPGGNDRPHV SHNNNEGGPF SISSQSESKC SPMPKRFKIG HDNSSAFLDV 360 SEHSKLDDSA SNRSVEIKAN SLEGRDTALS DSDSTYARKS EARQTVHTGT PILDAIIFRY 420 CLEGIHERTL LLREITHSVS NEDIVNFAEE VCLYAGCSHH RYQILMSKQL IQECTDTWNS 480 ISGNSHSVLW TNAIPEINKR FMRISRSATR SLSGKDLEVL RGIAGCGEDL SRENFEKMWY 540 WLYPVAFSLS KSQIHTLWEC TMPLWINGLI TKEEAEYALK GPRGLQKPGT FVIRFPTSRS 600 WPHPDAGSLV ITYVGADSTL HHKLLSLDLS NEDNRQGNPK QLQALLLEEP ELSQLARVN*

Sequence ? help Back to Top

Protein Sequence Length: 660 aa Download sequence

MTSERDCKVP FLALNEENKL SLFPLMFLHT DTKAQSPDSS SVWMNIPHIC TDIDCAREKW  60
VHVGCEVAAN RMRLHVNGTL VREKALSVLS KDQNYQDNVK KIALVGNNGD VEKLHAYVYD  120
LRLLPISTST KDHFIKNPPV KLTLDDSCIA DGIEEGSDGV WSIVGGKASC RRNFSLDVVL  180
LDALGRSVHK EMEIFASLVY ADNRAPVEKT RDDKEDPLLT SCDGLEFPTV DKPVILLRGR  240
AIFKLKISQL SSKSDNRLFL VRFNATGSQK YPFLEAYSRP IRCISRNRSF RPSVVGRRPF  300
SGSTLPDGTH SPGGNDRPHV SHNNNEGGPF SISSQSESKC SPMPKRFKIG HDNSSAFLDV  360
SEHSKLDDSA SNRSVEIKAN SLEGRDTALS DSDSTYARKS EARQTVHTGT PILDAIIFRY  420
CLEGIHERTL LLREITHSVS NEDIVNFAEE VCLYAGCSHH RYQILMSKQL IQECTDTWNS  480
ISGNSHSVLW TNAIPEINKR FMRISRSATR SLSGKDLEVL RGIAGCGEDL SRENFEKMWY  540
WLYPVAFSLS KSQIHTLWEC TMPLWINGLI TKEEAEYALK GPRGLQKPGT FVIRFPTSRS  600
WPHPDAGSLV ITYVGADSTL HHKLLSLDLS NEDNRQGNPK QLQALLLEEP ELSQLARVN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78540.1	1e-157	STAT family protein