PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_04.1146

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 376aa MW: 41473.5 Da PI: 7.8357

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_04.1146	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.6	8.2e-31	258	316	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d +++++tYeg+Hnh+ evm.model.AsparagusV1_04.1146 258 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAtGCPVRKQVQRCADDRTILITTYEGNHNHP 316 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 376 aa Download sequence
MDKGGGGLSL DHTPNSVSLP FLIKRKQPMD SAHRFDEVDF FSGEKKARPT TADNTNLDLT 60 IKKEDLNIST GLNLLTVNTG SDQSTIDDGS SMNEDDKEAK HELAAMQAEL ARMSEENQRL 120 RGVLSQVTNN YNALQMHLLA LMQQRSQRAN DQVDDEKTDV KKVENGSIPI MPRQFMDLGP 180 SSTAAEAQDE PSHSSTDAGS PVRSASPTNK EMVPFGREEA PEAKLANSSS KGAEQAQEAT 240 MRKARVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAD 300 DRTILITTYE GNHNHPLPPR HGDGGQRHQP PRRCLSGVDV RAPTALMNST SWLEPYCLAR 360 QAWPHLRFAP FPTVN*

Sequence ? help Back to Top

Protein Sequence Length: 376 aa Download sequence

MDKGGGGLSL DHTPNSVSLP FLIKRKQPMD SAHRFDEVDF FSGEKKARPT TADNTNLDLT  60
IKKEDLNIST GLNLLTVNTG SDQSTIDDGS SMNEDDKEAK HELAAMQAEL ARMSEENQRL  120
RGVLSQVTNN YNALQMHLLA LMQQRSQRAN DQVDDEKTDV KKVENGSIPI MPRQFMDLGP  180
SSTAAEAQDE PSHSSTDAGS PVRSASPTNK EMVPFGREEA PEAKLANSSS KGAEQAQEAT  240
MRKARVSVRA RSEAPMITDG CQWRKYGQKM AKGNPCPRAY YRCTMATGCP VRKQVQRCAD  300
DRTILITTYE GNHNHPLPPR HGDGGQRHQP PRRCLSGVDV RAPTALMNST SWLEPYCLAR  360
QAWPHLRFAP FPTVN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	7e-92	WRKY family protein