PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.995

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 317aa MW: 34636.7 Da PI: 9.8595

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.995	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12.7	0.00024	192	229	5	47
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekA 47 ne+ r+RR+++ ++ L l+P+ +K++ +Le+A evm.model.AsparagusV1_03.995 192 SNEIGRQRRSKMSDRVTILEGLMPWK-----RKMTRGPMLEEA 229 599**********************6.....455555555555 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MEQRKKVTKL LVSPSLAVPN AAASGSRIFH QELAGASSSR IVAEKFSDPI SRLKAPKQEL 60 MEQDTNLLVS TSLAAPDASA ACIRNFRLEL AGGSSSQNVS DPVSDLEAPI SESMAFNAVH 120 NPSYKLCPLP HLLSLEHHAP DPFAAPPLSI SPGDLFSVVD SSNKRFRSSP APPDPNPTRF 180 SVPISGSRLT RSNEIGRQRR SKMSDRVTIL EGLMPWKRKM TRGPMLEEAH TVHQFLEAQV 240 TALQTMRFSR RGQMIVAVDE VSGRLELNRQ QMLQVMMNSS MVQDLIYKKG CCVFSEEQVA 300 LLRHKMAMAG SSSASN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22100.1	1e-18	bHLH family protein