PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.79 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 231aa MW: 25408.6 Da PI: 7.0481 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.4 | 3.5e-05 | 37 | 86 | 1 | 54 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +++ + erE+ Rd++N f eL + l +a p + + Ka iL +A++ +++L evm.model.AsparagusV1_03.79 37 KKAHKAEREKLKRDQLNGLFLELGRALEPA---P-RNNGKACILDEATRILRDL 86 577889***********************8...2.55999*******9999877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MVPELRASTT DCNMNVASEQ PVVGSLPSKK SQAKAPKKAH KAEREKLKRD QLNGLFLELG 60 RALEPAPRNN GKACILDEAT RILRDLILRV EGLRKESATL LTESRYVMVE KDELKDENLA 120 LAAEIARLNT ELQERQKSDD PTRHKTDTDP ALCTQTPVAP LYVLPFSQDL QPLSEAVIAP 180 SSPKPTTQVR RPHARYPTPS DSWPLQVLSR HQHSSSSSSS NSGDEGSEEA * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G47640.2 | 8e-31 | bHLH family protein |