PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.73
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 87aa    MW: 9597.79 Da    PI: 7.3643
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.73genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.62.5e-0912511554
                                 HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                          HLH 15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                                 +iN+ +++L++llP+  + +s++ s +  L+++++YI+sL
  evm.model.AsparagusV1_03.73 12 EINELISKLQSLLPETRRRGSGRASASKLLKETCKYIQSL 51
                                 7**************669********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 87 aa     Download sequence    
MSSRRSGISE EEINELISKL QSLLPETRRR GSGRASASKL LKETCKYIQS LHQEVDDLSD  60
RLSDLMSTMD NGSAQAEIVR SLLRSS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26945.19e-12bHLH family protein