PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.649 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 106aa MW: 12004.7 Da PI: 9.3964 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44 | 5.2e-14 | 22 | 67 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W eEde l+++v+++G+++W++I ++ + Rt+k+c++rw + evm.model.AsparagusV1_03.649 22 KGPWMSEEDEVLLEYVQRHGPRDWSSIRSKGLLPRTGKSCRLRWVN 67 79*************************8876677**********87 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence |
MQGAAKVSSK RVNDRCGATT RKGPWMSEED EVLLEYVQRH GPRDWSSIRS KGLLPRTGKS 60 CRLRWVNKLQ PNLKTDTLDF FAAASKVESR DSIDFLMLEF LDNCL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G60460.1 | 6e-28 | MYB family protein |