PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.596
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 451aa    MW: 49925 Da    PI: 7.3873
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.596genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH52.68.2e-17260306455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  evm.model.AsparagusV1_03.596 260 VHNLSERRRRDRINEKMKALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 306
                                   6*************************8.....6******************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MTDFIRPDNE LVELLWRNGH VVMQSQTNRK PQATLRPEPQ PKPVVSVVNS SNLMQEDETA  60
SWFQYAFDYP LEKELCSELL DEMPMADAID ANKPNKEVIR DAEKNPFTMP PPKSQTTRLG  120
NFSHFSRPMR GDVGESSSIR TVGSSACGSN QVPNQGDVSN NLSRGVFEKR SKGRGPMISL  180
QEGVHANTFD TTVTSSSGGS GCSFGRTTGQ QSTSDQNNKR KGRDAEESEC HSEEAEYESI  240
EAKKHTQRPT STRKSRAAEV HNLSERRRRD RINEKMKALQ ELIPHCNKSD KASMLDEAIE  300
YLKSLQLQLQ LMWMGSGMAP MMFPGIQQYM PRVGVGMGHT SIPPINNPMQ LSRTPLVNHS  360
MPSSAPSNQM PMCPSPSLNP ANFQNVHHIP EPYARYFGFS HMQLPPQAVN LYSYGSQMVQ  420
QQNQTAAVAG SSSLPTSGIP MENLQNGHSG *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1265270ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43010.24e-51bHLH family protein