PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.596 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 451aa MW: 49925 Da PI: 7.3873 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 52.6 | 8.2e-17 | 260 | 306 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn ErrRRdriN+++ L+el+P++ K +Ka++L +A+eY+ksLq evm.model.AsparagusV1_03.596 260 VHNLSERRRRDRINEKMKALQELIPHC-----NKSDKASMLDEAIEYLKSLQ 306 6*************************8.....6******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 451 aa Download sequence |
MTDFIRPDNE LVELLWRNGH VVMQSQTNRK PQATLRPEPQ PKPVVSVVNS SNLMQEDETA 60 SWFQYAFDYP LEKELCSELL DEMPMADAID ANKPNKEVIR DAEKNPFTMP PPKSQTTRLG 120 NFSHFSRPMR GDVGESSSIR TVGSSACGSN QVPNQGDVSN NLSRGVFEKR SKGRGPMISL 180 QEGVHANTFD TTVTSSSGGS GCSFGRTTGQ QSTSDQNNKR KGRDAEESEC HSEEAEYESI 240 EAKKHTQRPT STRKSRAAEV HNLSERRRRD RINEKMKALQ ELIPHCNKSD KASMLDEAIE 300 YLKSLQLQLQ LMWMGSGMAP MMFPGIQQYM PRVGVGMGHT SIPPINNPMQ LSRTPLVNHS 360 MPSSAPSNQM PMCPSPSLNP ANFQNVHHIP EPYARYFGFS HMQLPPQAVN LYSYGSQMVQ 420 QQNQTAAVAG SSSLPTSGIP MENLQNGHSG * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 265 | 270 | ERRRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43010.2 | 4e-51 | bHLH family protein |