PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.43 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ZF-HD | ||||||||
Protein Properties | Length: 114aa MW: 13170.9 Da PI: 5.6793 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 65.8 | 7.8e-21 | 6 | 56 | 3 | 60 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 +rY eC+kNhAa++Gg+a+DGC+Efm++ geegt+aa+ HRnFHRr +e+e evm.model.AsparagusV1_03.43 6 VMRYAECQKNHAARVGGYALDGCREFMAD-GEEGTSAAM------LHRNFHRRVQEYE 56 689*************************8.888777666......5********9986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 114 aa Download sequence |
MRRRRVMRYA ECQKNHAARV GGYALDGCRE FMADGEEGTS AAMLHRNFHR RVQEYESMCE 60 CAVTQNWWNE KFLLKRSEDL NDCINGSQCG LVQGVCNQCS MPFLVEEELN WEP* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 3e-22 | ZF-HD family protein |