PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.383 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 177aa MW: 19379.1 Da PI: 7.132 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 42.2 | 1.5e-13 | 23 | 69 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r+h+e+Er+RR+riNs +++Lr+++P+a +++Ka+ L ++v+ +++L evm.model.AsparagusV1_03.383 23 RSHSEAERKRRQRINSHLATLRTIIPSA-----ARMDKATLLGEVVRQVREL 69 79*************************8.....79*******9999887776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 177 aa Download sequence |
MEIVDVGSLI TEARSTVKTR AHRSHSEAER KRRQRINSHL ATLRTIIPSA ARMDKATLLG 60 EVVRQVRELH EMTEDVAVVV PTEADGVHVE EEGGLVRAWI CCPDRPGLLT DVDRAVGSVH 120 ARTVRAEIST IGGRTRSQLE LESESGVEED RSVLFAGLRS VLAGLVVGDQ CKRQRL* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 29 | 34 | ERKRRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G25710.1 | 5e-30 | bHLH family protein |