PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.3209
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HSF
Protein Properties Length: 385aa    MW: 43607 Da    PI: 4.8479
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.3209genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind108.55.1e-34401312102
                                    HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEE CS
                   HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweF 81 
                                    Fl+k++e++ed++++ ++sws+  nsf+v+d+++fa+++LpkyFkh nf+SF+RQLn+YgF+kv+ ++         weF
  evm.model.AsparagusV1_03.3209  40 FLSKTFEMVEDPDTDPVVSWSRGRNSFIVWDSHKFASTLLPKYFKHCNFSSFIRQLNTYGFRKVDPDR---------WEF 110
                                    9****************************************************************999.........*** PP

                                    EESXXXXXXXXXXXXXXXXXX CS
                   HSF_DNA-bind  82 khksFkkgkkellekikrkks 102
                                    +++ F  g+k+ll+ ikr+++
  evm.model.AsparagusV1_03.3209 111 ANQRFLGGQKHLLKGIKRRRN 131
                                    ******************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 385 aa     Download sequence    
MEHLVVVKDE VEEEEEEEVV EIVVSPRPIE GLHETGPPPF LSKTFEMVED PDTDPVVSWS  60
RGRNSFIVWD SHKFASTLLP KYFKHCNFSS FIRQLNTYGF RKVDPDRWEF ANQRFLGGQK  120
HLLKGIKRRR NIHHSSHHPH HQQQGAHIQP AQTSEACIEL GEFGLETEAE RLKRDRNILI  180
MEIAKLRQQQ QNSRAQVTEM EQRVECTERK QKQTMVFLAK ALKNPGLVHQ LSLLSKQKQQ  240
LLGKAAKKRR LPPNTGFEHV QDGEEVGGEL EIENMISELV GCGESSSSRA KREEKVLLES  300
SNQNADGISG AMWDELLNEA LLPETGTEVE ELVRDTIGVV VKEGDDYEVD IGVEVEDLVS  360
DTIGWGGDIQ NFVDDMGFLD PSQP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1123129LKGIKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26150.13e-97HSF family protein