PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.3153
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YB
Protein Properties Length: 145aa    MW: 15920.2 Da    PI: 4.3163
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.3153genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB57.82.6e-181180372
                          NF-YB  3 eqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwala 72
                                   ++d  lP a + +i+k++lP + ++++da++++ ec +efi +++se+++ c re+++ti+++ +l al 
  evm.model.AsparagusV1_03.3153 11 KEDVSLPKATMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLISSESNEVCSREDKRTIAPEHVLKALE 80
                                   68999*************************************************************9975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEPMDIVGKS KEDVSLPKAT MFKIIKEMLP PDVRVARDAQ DLLVECCVEF INLISSESNE  60
VCSREDKRTI APEHVLKALE MAHNTKLLMC NIALELSDEM VEEGDNFAPK NGLSKGGKFS  120
GAGDDRGEAL AEQQSDVLLR LELE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G23090.21e-49NF-YB family protein