PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_03.30 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | Nin-like | ||||||||
Protein Properties | Length: 262aa MW: 30956.4 Da PI: 6.1927 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 91.1 | 8.7e-29 | 113 | 163 | 2 | 52 |
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++++e++skyF++pi++AA+eL v+lT+LK++CR++GI+RWPhRk+ksl evm.model.AsparagusV1_03.30 113 EKNLTFEEVSKYFYMPITQAARELHVGLTLLKKKCRELGIPRWPHRKMKSL 163 79***********************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 262 aa Download sequence |
MDIKQLDNWV GYEGQMTAPD YLELSGFPHW RDWQLDFPVV EEDVVEAVPL MQRYQWEPLF 60 PPHDDLFEVE FNTLLDEENH RPWESTHMTK KRNLIEENNG KEKELCIRGS RDEKNLTFEE 120 VSKYFYMPIT QAARELHVGL TLLKKKCREL GIPRWPHRKM KSLQALIKNV QELEREEGEA 180 GEVQLRSTIE ILEQEKKLME KKPDMKLEEK TKRLRQACFK ANYKKRRLTL MSAAADQEQH 240 SPASLCNGSV LEYFNGQTKR F* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G18790.1 | 4e-44 | Nin-like family protein |