PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.2764

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 274aa MW: 30851.5 Da PI: 10.1579

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.2764	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	29.9	9.9e-10	137	181	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h +rEr+RR+r+ ++++ L ++lP + K +K +i++ A Y+k+L evm.model.AsparagusV1_03.2764 137 HMMRERQRRERLSQSYADLHSMLPYR-----SKGDKNSIVQSAALYVKEL 181 889********************8.....6999999********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MVSTCRKKFL WLFGLTSFIQ SRGSFRLALK DADKVFDDIY AGVVETKQMR GGYSSGVLSP 60 LSGYSGILSP LSEQPSAVPR SAFVSYTRPE FHDSSDFLSS QANKKKNIHL RMIDLLRRIP 120 RDRLEARTGE YSPGFRHMMR ERQRRERLSQ SYADLHSMLP YRSKGDKNSI VQSAALYVKE 180 LKGVKEELLK RNEELRIKSV ENSSLGGEKI KIRLDPASTL DSMIGALQCL KSMDAKARAI 240 QTEFSGNELM AIINIESKVG ANELERALME TCR*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	142	147	RQRRER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43650.1	4e-15	bHLH family protein