PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2587
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 281aa    MW: 30970.6 Da    PI: 8.7163
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2587genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like89.82.4e-2872125155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    kpr++W+ eLH++Fv+av+qL G+ekA+Pk+ilelm+v+gLt+e+v+SHLQk+Rl
  evm.model.AsparagusV1_03.2587  72 KPRVVWSVELHQQFVSAVSQL-GIEKAVPKRILELMNVPGLTRENVASHLQKFRL 125
                                    79*******************.********************************8 PP
2Myb_DNA-binding40.65.8e-1374124148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r  W+ e+++++v av qlG +   +k+I + m+  g+t++++ s++qk++
  evm.model.AsparagusV1_03.2587  74 RVVWSVELHQQFVSAVSQLGIEkaVPKRILELMNvPGLTRENVASHLQKFR 124
                                    678**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MHVIRKKQNE TEYSGSMDDT HRNRRVSDDA EYASSVHDGA DVSWRSNKKK RDTKEDENSG  60
ELDHEDSSSS KKPRVVWSVE LHQQFVSAVS QLGIEKAVPK RILELMNVPG LTRENVASHL  120
QKFRLYLKRI SGVAQHQSGF PNSLCGPIEP NTKVGSMGRL DFQALAASGQ IPSQTLAALH  180
AELLGHPSNS LVLPSMNSPL LQSRQEPKXX XXXEVAFGQP IFKCQSSISK QFSASIAGEH  240
ANLGGVNLNN TQKGNMMVQE LQKQHANFVV SEPHHVINVT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.11e-56ARR-B family protein