PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.230

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CAMTA

Protein Properties

Length: 502aa MW: 56183.4 Da PI: 5.4505

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.230	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	182.2	6e-57	20	136	3	118
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevly 82 +e ++rwl++ ei++iL n++k++++ e+++rp+sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK ++v+vl+ evm.model.AsparagusV1_03.230 20 QEaQHRWLRPAEICEILRNYQKFHIAPEPPHRPSSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKADSVDVLH 100 5559*************************************************************************** PP CG-1 83 cyYahseenptfqrrcywlLeeelekivlvhylevk 118 cyYah+een++fqrr+yw+Lee++ +ivlvhylevk evm.model.AsparagusV1_03.230 101 CYYAHGEENESFQRRTYWMLEETFMHIVLVHYLEVK 136 *******************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 502 aa Download sequence
MADGRQYSLN QQLGIEQILQ EAQHRWLRPA EICEILRNYQ KFHIAPEPPH RPSSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKADSVDVLH CYYAHGEENE SFQRRTYWML 120 EETFMHIVLV HYLEVKGGKA SSYSRTRDDK EITKSSQTDS PICSNSFTSQ DQLPSQTTDA 180 GSPSSAQTSE YEDSQSDNYQ ARSGHHPLLG LQQYENGHLM DVHLLNSNIP ISSLINQYNN 240 QSSLVSTPET DLCSGSKESI AKVFNRIGLG LGFNSGRTQL DLPPWDEVLE HHATGISSTP 300 VPTSLQAEAA ATSDITKQVN LTFGELLTGG INFKQQDESK AELQEHPRDI DSVASSQANV 360 KCELSLDGIM SSPAILKQSS AGLSNVEGEG LKKYDSFSKW MSKEFTEVDD PHKSTSQAYW 420 NFMENVRVDD SGMSNPEQDA FIVGPSVSQD QLFSIIDYSP NWAYSGIETK VLITGTFLKE 480 KKDVENIKLS CMFAPLSCST T*

Sequence ? help Back to Top

Protein Sequence Length: 502 aa Download sequence

MADGRQYSLN QQLGIEQILQ EAQHRWLRPA EICEILRNYQ KFHIAPEPPH RPSSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKADSVDVLH CYYAHGEENE SFQRRTYWML  120
EETFMHIVLV HYLEVKGGKA SSYSRTRDDK EITKSSQTDS PICSNSFTSQ DQLPSQTTDA  180
GSPSSAQTSE YEDSQSDNYQ ARSGHHPLLG LQQYENGHLM DVHLLNSNIP ISSLINQYNN  240
QSSLVSTPET DLCSGSKESI AKVFNRIGLG LGFNSGRTQL DLPPWDEVLE HHATGISSTP  300
VPTSLQAEAA ATSDITKQVN LTFGELLTGG INFKQQDESK AELQEHPRDI DSVASSQANV  360
KCELSLDGIM SSPAILKQSS AGLSNVEGEG LKKYDSFSKW MSKEFTEVDD PHKSTSQAYW  420
NFMENVRVDD SGMSNPEQDA FIVGPSVSQD QLFSIIDYSP NWAYSGIETK VLITGTFLKE  480
KKDVENIKLS CMFAPLSCST T*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-105	CAMTA family protein