PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.2267 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 158aa MW: 17180.2 Da PI: 4.9914 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 40.9 | 3.7e-13 | 74 | 152 | 15 | 99 |
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 +++p + a+e g++ + tl d+sg+sW v +i +++g+ l+ GW++F n L egD + F+ + ++v evm.model.AsparagusV1_03.2267 74 HVRIPAEVAKEVGLIR----KTTLIDPSGKSWAVDII-LRSDGQLELGVGWSSFSVGNSLVEGDKCEFEIFA-GGDYMRV 147 479*********9993....68999***********5.7888899************************654.5666899 PP EEE-S CS B3 95 kvfrk 99 ++fr+ evm.model.AsparagusV1_03.2267 148 HIFRA 152 99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 158 aa Download sequence |
MQHDIQMDSQ SPASTSPSMI STNSVLDERP VDDKNIVPGL STSDDKESVP NAPERSESSH 60 PKFTIRLKLN HLYHVRIPAE VAKEVGLIRK TTLIDPSGKS WAVDIILRSD GQLELGVGWS 120 SFSVGNSLVE GDKCEFEIFA GGDYMRVHIF RADGGNA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-10 | B3 family protein |