PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.2258

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 895aa MW: 98172.4 Da PI: 7.8764

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.2258	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	61.1	1.9e-19	386	486	1	99
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--T CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLke 76 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d sg++W +++++ +++s++yvl+ G ++ +L++ evm.model.AsparagusV1_03.2258 386 FEKMLSASDAGRIGRLVLPKKCAEAYfpPISQPEGLPLKVQDASGKEWAFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQA 464 89************************555566778***********99899999999.********** PP T-EEEEEE-SSSEE..EEEEE-S CS B3 77 gDfvvFkldgrsefelvvkvfrk 99 gD+v+F++++ e++lv++++++ evm.model.AsparagusV1_03.2258 465 GDTVTFSRID-PEGKLVMGFRKA 486 *****987.777788777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MSTTTSTAAA VPATANLKIC FNSLCKEPKS EAQRRKGWKL RSGDHAELCD RCSCAYEQGT 60 FCETFHLDAA GWRKCESCGK RVHCGCIVSA SSYVLLDAGG IECILCAKKT LSMTPNSMWS 120 PSLILSSQVS ERPKEHAGKS WHQMTGSFPS QWRQGPHLWS TGIQSDLQQR LSYEFDRPLH 180 SERLIAGVRA SISAQDKKVA EPSERLTPGN HVLRNGTVAG LDAASVFNMY REEGNVLQDS 240 GHHLGDNDLG SSRKGVVTDP CSASTSGVNF ESRPNSYAKP LQSTILKGES SPLLGLAASF 300 SSPNGSNGPG RASMTQSQRQ MPPPIPKQLS SNPHNLNDNS VEVRSGRSRV DARTRTQLLP 360 RYWPRITDQE LKQINGDSNS VITPLFEKML SASDAGRIGR LVLPKKCAEA YFPPISQPEG 420 LPLKVQDASG KEWAFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPEGKLV 480 MGFRKASNAS SEQDAQTVKT GNGFLTPPEN NKNATDFSEN GPFRSQKVGA ESKSSSNTTD 540 EAILSKFGKN GFIQKDGSAT KLSHGPSRRK GGNLGSRNKR LRIESEDSIE LKVTWEQAQE 600 LLRPPPNDNP NVVVIEGHEI EEYEESPVLG KPTIFTTNQA GENIQWAQCE DCFKWRKLPV 660 DALLPSKWTC SENKWDPERS SCSTAQEIDT ELADILPTTA GSRRSRVKLE NNNLEVSDGL 720 DTLANLAILG EGECLPPSSQ PTTKHPRHRP GCTCIVCIQP PSGKGPKHKQ SCTCNVCLTV 780 KRRFRTLMLR REKKQTEKEA ETSKKQIVDQ SLEMMISGSE PLQREGKCIG DGSLPQSPVI 840 CVEGEFDNDA ENRVISPSPL KAQIDLNIQP EREEEPSPKS DTGSIMRPFA DATA*

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MSTTTSTAAA VPATANLKIC FNSLCKEPKS EAQRRKGWKL RSGDHAELCD RCSCAYEQGT  60
FCETFHLDAA GWRKCESCGK RVHCGCIVSA SSYVLLDAGG IECILCAKKT LSMTPNSMWS  120
PSLILSSQVS ERPKEHAGKS WHQMTGSFPS QWRQGPHLWS TGIQSDLQQR LSYEFDRPLH  180
SERLIAGVRA SISAQDKKVA EPSERLTPGN HVLRNGTVAG LDAASVFNMY REEGNVLQDS  240
GHHLGDNDLG SSRKGVVTDP CSASTSGVNF ESRPNSYAKP LQSTILKGES SPLLGLAASF  300
SSPNGSNGPG RASMTQSQRQ MPPPIPKQLS SNPHNLNDNS VEVRSGRSRV DARTRTQLLP  360
RYWPRITDQE LKQINGDSNS VITPLFEKML SASDAGRIGR LVLPKKCAEA YFPPISQPEG  420
LPLKVQDASG KEWAFQFRFW PNNNSRMYVL EGVTPCIQSM QLQAGDTVTF SRIDPEGKLV  480
MGFRKASNAS SEQDAQTVKT GNGFLTPPEN NKNATDFSEN GPFRSQKVGA ESKSSSNTTD  540
EAILSKFGKN GFIQKDGSAT KLSHGPSRRK GGNLGSRNKR LRIESEDSIE LKVTWEQAQE  600
LLRPPPNDNP NVVVIEGHEI EEYEESPVLG KPTIFTTNQA GENIQWAQCE DCFKWRKLPV  660
DALLPSKWTC SENKWDPERS SCSTAQEIDT ELADILPTTA GSRRSRVKLE NNNLEVSDGL  720
DTLANLAILG EGECLPPSSQ PTTKHPRHRP GCTCIVCIQP PSGKGPKHKQ SCTCNVCLTV  780
KRRFRTLMLR REKKQTEKEA ETSKKQIVDQ SLEMMISGSE PLQREGKCIG DGSLPQSPVI  840
CVEGEFDNDA ENRVISPSPL KAQIDLNIQP EREEEPSPKS DTGSIMRPFA DATA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	1e-145	B3 family protein