PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2178
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 300aa    MW: 33282.1 Da    PI: 5.505
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2178genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.31.7e-102242641055
                                    HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    r+RR+riN+++  L+ l+P+      +K++ +++Le+Av+Y+k Lq
  evm.model.AsparagusV1_03.2178 224 RKRRERINERLRILQNLVPNG-----TKVDISTMLEEAVQYVKFLQ 264
                                    9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MNTFAEIDWS SFNAIMASEE SELLAQLFNE PDQDLSLGVS SLFWPDQVQN ANTSSCYWPQ  60
EKCNATIFST TISSSSLFDQ STACQSYYNM TASNVMPEIN NDNKNGSYFS GETSSEDAGD  120
STMSLAQQKR KLNKPAENDN PKKKVKIGKN QKTKKHHEKI ITCDKDEKCS SSCCSEDDSN  180
TSQEKNGGEN MGSGSKGKNA ALNLNGKARA SRGSATDPQS LYARKRRERI NERLRILQNL  240
VPNGTKVDIS TMLEEAVQYV KFLQLQIKLL SSDDLWMYAP LAYNGMDIGL DLRISQPRL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G14760.14e-49bHLH family protein