PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_03.2136 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | bHLH | ||||||||
Protein Properties | Length: 187aa MW: 20441.9 Da PI: 6.5139 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.9 | 0.0002 | 80 | 115 | 14 | 54 |
HHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 d++++++++L++l+ + + K + a++L +A YIk L evm.model.AsparagusV1_03.2136 80 DKLRDRISTLQQLVSPfC------KSDTASVLHEALGYIKFL 115 7899************77......99**************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 187 aa Download sequence |
MESEEASFME LLGSELLYLA PDHGVCEKLS LNSSLTFTQS SSSSSTTSST AEEVTTETKA 60 HKKQKKGPSA YLSTIKVKKD KLRDRISTLQ QLVSPFCKSD TASVLHEALG YIKFLHDQVQ 120 VLSSPYLQPS LPKTASLQDE EQRTSDLRSR GLCLVPISRT ENVANDNGAD IWSSSTFRGS 180 INLYST* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G19500.1 | 4e-36 | bHLH family protein |