PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.2133

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

ERF

Protein Properties

Length: 465aa MW: 51606.3 Da PI: 4.5437

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.2133	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	57.8	2.7e-18	115	164	2	55
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++ GVr+++ +grWvAeI+d ++ r++lg+f+tae+Aa+a+++a+ l+g evm.model.AsparagusV1_03.2133 115 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEDAARAYDEAACLLRG 164 789****.7*****33....35********************99998 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MLLHGQPAIK CKPLFQGTAM MTLFPLPTGL QYDKWILLRH LTELFPLEVW SFLLAWNSTT 60 VCWIQLKTQS QQEMARKRKN TEPEVSGMSS GASSVGHVGN EGVAAFGGIR RARKRFVGVR 120 QRPSGRWVAE IKDTIQKIRV WLGTFDTAED AARAYDEAAC LLRGANTRTN FWPCSPSQHS 180 ATSVLPSKIT NLLLLRLKAR NGLASPENEQ EHGLQEYELH QSAPTQDLLC QQKQHQHQQQ 240 PYIGEEEEGE ESGDIHFTDF LNDTNFDTSD GQDVIYESVQ NVCNEYRDHS GEVGQVGECS 300 GGGEEGGIDL SEIDFQFDGM DDSSFCFYSP FEIPGAIEEG IEEEEDCTGD EPSMIRAAMK 360 RMKYERKISA SLYALNGISE CLKMKVNETS RGGRGSFADN LSYLSNACRN QQEGNVKEER 420 DTVQSQQNPT LSSELSSSSD SGSGSITDGE LSIWSCLDPI CYVT*

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MLLHGQPAIK CKPLFQGTAM MTLFPLPTGL QYDKWILLRH LTELFPLEVW SFLLAWNSTT  60
VCWIQLKTQS QQEMARKRKN TEPEVSGMSS GASSVGHVGN EGVAAFGGIR RARKRFVGVR  120
QRPSGRWVAE IKDTIQKIRV WLGTFDTAED AARAYDEAAC LLRGANTRTN FWPCSPSQHS  180
ATSVLPSKIT NLLLLRLKAR NGLASPENEQ EHGLQEYELH QSAPTQDLLC QQKQHQHQQQ  240
PYIGEEEEGE ESGDIHFTDF LNDTNFDTSD GQDVIYESVQ NVCNEYRDHS GEVGQVGECS  300
GGGEEGGIDL SEIDFQFDGM DDSSFCFYSP FEIPGAIEEG IEEEEDCTGD EPSMIRAAMK  360
RMKYERKISA SLYALNGISE CLKMKVNETS RGGRGSFADN LSYLSNACRN QQEGNVKEER  420
DTVQSQQNPT LSSELSSSSD SGSGSITDGE LSIWSCLDPI CYVT*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19790.1	2e-21	ERF family protein