PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.2023
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 346aa    MW: 38127.9 Da    PI: 7.8475
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.2023genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY99.61.9e-3176134160
                                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                                    +dDgynWrKYGqK+vkg ++prsYY+Ct+++Cpv+kkvers  +++v+ei+Y+g+H+h+k
  evm.model.AsparagusV1_03.2023  76 VDDGYNWRKYGQKQVKGGKYPRSYYKCTHPSCPVTKKVERSL-EGEVTEIIYKGQHDHQK 134
                                    59****************************************.***************85 PP
2WRKY106.51.4e-33225283159
                                    ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                    ldDg++WrKYGqK+vkg+++prsYYrCtsagC+v+k+ver+++dpk v++ Yeg+Hnhe
  evm.model.AsparagusV1_03.2023 225 LDDGFRWRKYGQKVVKGNPYPRSYYRCTSAGCNVRKQVERASTDPKEVITAYEGKHNHE 283
                                    59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MSPFSVPPPA AIFSPNSGPG GISHQQSLAQ VTSQDAQSHS QMHNLPDANN NSFESGCTSH  60
CNQRSQPASL IIDKPVDDGY NWRKYGQKQV KGGKYPRSYY KCTHPSCPVT KKVERSLEGE  120
VTEIIYKGQH DHQKPPRHSK ESNELTGNLD CANNADTSSK KESEFGHGTS EQLPGSSDDE  180
EGDADSEPEP KKRAVDVRET EPTSSHRTVT EPRIIVQTTS EVDLLDDGFR WRKYGQKVVK  240
GNPYPRSYYR CTSAGCNVRK QVERASTDPK EVITAYEGKH NHEIPAARNS SHNTANSIAA  300
ADILQPKVHN PIPSHQSFFK RGDLRNNVLL ASCSSPAERT RHALS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03340.17e-92WRKY family protein