PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1807

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CAMTA

Protein Properties

Length: 503aa MW: 56408.3 Da PI: 4.6918

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1807	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	180.6	1.9e-56	19	136	2	118
CG-1 2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvev 80 l+e ++rwl++ ei++iL n++k++++ e+++rp sgsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+++v evm.model.AsparagusV1_03.1807 19 LHEaQHRWLRPAEICEILRNYRKFRIAPEPPNRPCSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKSGSIDV 98 4555************************************************************************** PP CG-1 81 lycyYahseenptfqrrcywlLeeelekivlvhylevk 118 l+cyYah+een++fqrr+yw+Lee++ +ivlvhy+evk evm.model.AsparagusV1_03.1807 99 LHCYYAHGEENENFQRRSYWMLEEDFMHIVLVHYREVK 136 *********************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MAESRRYALT PQLDIQQILH EAQHRWLRPA EICEILRNYR KFRIAPEPPN RPCSGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEENE NFQRRSYWML 120 EEDFMHIVLV HYREVKNSKA SYTRTRDAEE NAQVAQMDSP AGSSSFTNQS QLPSQVTDAG 180 SPISTQTSEY EDSESADNYQ ANSRYNSLVE MQQYGDGPMK DIHVLNSYAP VSLLNDQGDH 240 QSLRAAVPAS NLYSVSQEGA TRVFDGAGPE LTWSGSKSKL GLTSWEEVLE HCTPEFQSAL 300 FDPTVASGES ANLVNPQQFS LMLGEYFPND VGLNQGNIAS AQGNPVWQLD NAEVGSPVMS 360 NLDVENELSV EGNRTYASLL KQLSLDLSHP GEGLKKNDSF SRWMSSELGE VDDSQLQSTS 420 GAYWNTIESE SVGDVPGMSN QEQLDSYLVS PSISQEQLFS IVDFSPSWAY TGLETKVLIS 480 GTFLRNKEYV EKCNWSCMFG GN*

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MAESRRYALT PQLDIQQILH EAQHRWLRPA EICEILRNYR KFRIAPEPPN RPCSGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKSGSIDVLH CYYAHGEENE NFQRRSYWML  120
EEDFMHIVLV HYREVKNSKA SYTRTRDAEE NAQVAQMDSP AGSSSFTNQS QLPSQVTDAG  180
SPISTQTSEY EDSESADNYQ ANSRYNSLVE MQQYGDGPMK DIHVLNSYAP VSLLNDQGDH  240
QSLRAAVPAS NLYSVSQEGA TRVFDGAGPE LTWSGSKSKL GLTSWEEVLE HCTPEFQSAL  300
FDPTVASGES ANLVNPQQFS LMLGEYFPND VGLNQGNIAS AQGNPVWQLD NAEVGSPVMS  360
NLDVENELSV EGNRTYASLL KQLSLDLSHP GEGLKKNDSF SRWMSSELGE VDDSQLQSTS  420
GAYWNTIESE SVGDVPGMSN QEQLDSYLVS PSISQEQLFS IVDFSPSWAY TGLETKVLIS  480
GTFLRNKEYV EKCNWSCMFG GN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-120	CAMTA family protein