PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1804
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 287aa    MW: 32775.9 Da    PI: 8.161
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1804genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.94.9e-054663219
                                   HHHHHHHHHHHHHHHHHH CS
                            HLH  2 rrahnerErrRRdriNsa 19
                                   r +h++ E+rRR++iN++
  evm.model.AsparagusV1_03.1804 46 RSKHSATEQRRRSKINDR 63
                                   889*************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MEILSRSSEE DKDEYLRHKG SSRRGDFTVR FDGKNAELKQ WMLTPRSKHS ATEQRRRSKI  60
NDRSVILMDN ASSPIFGERK TSLDDQEKIA LLSSKKRKWG GGGGGESERD QELAKELKLC  120
KKEQDDDDVE LNLDAPLPLE WERCLDIKSG QIHFYNTRTH KRTSKDPRSS PRPSLDLELN  180
LNLTNQVDQQ VRTEHEPSNE TDRQLIKRKD DNSGRPSSPS PSWISFDTDR QEMVAAVCVR  240
CHMLVMMCKA TPSCPNCKFV HPQGQSSTSF HEISKPLGFR LLCCKD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08130.27e-08bHLH family protein