PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | evm.model.AsparagusV1_03.177 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
|
||||||||
Family | EIL | ||||||||
Protein Properties | Length: 237aa MW: 25904.2 Da PI: 12.052 | ||||||||
Description | EIL family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | EIN3 | 30.1 | 8.6e-10 | 104 | 139 | 62 | 100 |
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS EIN3 62 kemevcnaqGfvYgiipekgkpvegasdsLraWWkekve 100 ++m vcna+GfvYgi+pe+g+p +g + L+ + v+ evm.model.AsparagusV1_03.177 104 QMMDVCNARGFVYGIVPESGRPITGNDGRLQ---RQRVR 139 59****************************9...88887 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 237 aa Download sequence |
MIYLVQLASP LKKKQNYHGP FLRRESRRRR RRRARGSNVE GSTAVGKAEA SELADVSSSG 60 AVVAPKEDGS SPRRGPEVHG QNDGRLQRQR VRLRDRAGVR PPDQMMDVCN ARGFVYGIVP 120 ESGRPITGND GRLQRQRVRL RDRAGVRPPD HRLLAGPEDG RGPMRPERCG RTRTASFHTA 180 GGPPTSRTPS SILAGPEDGR GPMRPERCGR TRTASFTPPE ALRRAGDRAP DSGTIP* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 12 | 33 | KKKQNYHGPFLRRESRRRRRRR |
2 | 23 | 32 | RRESRRRRRR |
3 | 24 | 33 | RRESRRRRRR |
4 | 27 | 32 | RRRRRR |
5 | 27 | 33 | RRRRRRR |
6 | 27 | 35 | RRRRRRRAR |
7 | 28 | 33 | RRRRRR |
8 | 28 | 35 | RRRRRRAR |
9 | 28 | 36 | RRRRRRRAR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10120.1 | 7e-08 | EIL family protein |