PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1713

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB

Protein Properties

Length: 443aa MW: 49435.8 Da PI: 5.7285

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1713	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.7	2.7e-13	25	69	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +WT+eEdell + v G+++W++Ia+++ +t qc+ rw +yl evm.model.AsparagusV1_03.1713 25 SWTPEEDELLQEQVCAKGTDNWTSIAAKFK-DKTSRQCRRRWCTYL 69 6**************************9.**********997 PP
2	Myb_DNA-binding	45.9	1.3e-14	75	120	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +l +a k +G++ W+ Ia+ + gRt++ +k+r+ +++ evm.model.AsparagusV1_03.1713 75 KGSWSEEEDMILCEAQKIFGNR-WTEIAKVVS-GRTDNAVKNRFTTLR 120 799*****************.*****.*********9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MRSESDRETV KDPAPAPKKD RHIVSWTPEE DELLQEQVCA KGTDNWTSIA AKFKDKTSRQ 60 CRRRWCTYLN SEGKKGSWSE EEDMILCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFTTLR 120 KKRAKIESST KENDSWVNSN NKKVTIQNDF RYQILDPTES HNPVTGEVQL RSPLSVLPQN 180 INSVSGLLLP YCPDNNAKSA AHDVRTGSDH KTEGSFLRKD DPKLTALLQQ AELLTSLALK 240 VNSENTSQNL ESAWKELQDY LIQTGYRSIT PRTLDMDFFL DDFKDLIEDL KSENTGNNLS 300 WRRPGSHEES QESSECSTGS TNVFQVHTSS SSQAVSSQNA TDTWHQEDTL GLSMCNSQVI 360 WASSSLEEAK GNVRDSCTIT SSEFDSPHQT PSFKSLTEGI PTPMFSASER RFLVGVLGIS 420 SPAPGPSTSQ PPSCKRILLD SL*

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MRSESDRETV KDPAPAPKKD RHIVSWTPEE DELLQEQVCA KGTDNWTSIA AKFKDKTSRQ  60
CRRRWCTYLN SEGKKGSWSE EEDMILCEAQ KIFGNRWTEI AKVVSGRTDN AVKNRFTTLR  120
KKRAKIESST KENDSWVNSN NKKVTIQNDF RYQILDPTES HNPVTGEVQL RSPLSVLPQN  180
INSVSGLLLP YCPDNNAKSA AHDVRTGSDH KTEGSFLRKD DPKLTALLQQ AELLTSLALK  240
VNSENTSQNL ESAWKELQDY LIQTGYRSIT PRTLDMDFFL DDFKDLIEDL KSENTGNNLS  300
WRRPGSHEES QESSECSTGS TNVFQVHTSS SSQAVSSQNA TDTWHQEDTL GLSMCNSQVI  360
WASSSLEEAK GNVRDSCTIT SSEFDSPHQT PSFKSLTEGI PTPMFSASER RFLVGVLGIS  420
SPAPGPSTSQ PPSCKRILLD SL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G14350.1	2e-83	MYB family protein