PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1708 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 91aa MW: 10181.4 Da PI: 8.5297 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 21.1 | 5.5e-07 | 19 | 59 | 14 | 54 |
HHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 14 driNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 d+i + ++L++llP+ + + + s + +L++++ YI+sL evm.model.AsparagusV1_03.1708 19 DQIADLVSKLQSLLPETQARRTDRASASRVLQETCSYIRSL 59 6899999*********75778888***************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 91 aa Download sequence |
MSSRRSRSRQ SSSSRITDDQ IADLVSKLQS LLPETQARRT DRASASRVLQ ETCSYIRSLH 60 REVDDLSERL SELLETSDTA QAAIIRSLLM * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26945.1 | 2e-22 | bHLH family protein |