PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1623
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 332aa    MW: 36712.9 Da    PI: 8.5622
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1623genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.33.1e-32169222255
                        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  evm.model.AsparagusV1_03.1623 169 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 222
                                    9****************************************************7 PP
2Myb_DNA-binding47.44.5e-15170221148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWT  ++ ++v+av++lGg+   t+k++ + m  k +tl ++ks++q+y+
  evm.model.AsparagusV1_03.1623 170 RMRWTSSLHARFVHAVELLGGHeraTPKSVLELMDvKDLTLAHVKSHLQMYR 221
                                    89************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MAFEGVSIET PSMPPPSPDL SLHISPPNTD LSLSSPSPSS TTAHHRRPNF LDSSPSPDAS  60
SRPIKGIPIY NNGSTHFPFL QPYHHSPSTN PNFLNPGAVN AEILAPYHRI ATNPLSRFNS  120
FPAINDSMVR SVHHHHHNQF HHGMEMGNGM MMRGRFLSKM PVKRSMRAPR MRWTSSLHAR  180
FVHAVELLGG HERATPKSVL ELMDVKDLTL AHVKSHLQMY RTVKTTDHRP AASSGQSDGS  240
GEEDPSIQRL IDNRSPEGPT KTPDTTRWSN SSSRGNWLQA NSSDNIDGVI EPTAFSSHLE  300
DSENSAVNCS PGPREERRKP SLEFTLGRPE W*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.12e-50G2-like family protein