PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1585 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | M-type_MADS | ||||||||
Protein Properties | Length: 178aa MW: 19854.7 Da PI: 5.4566 | ||||||||
Description | M-type_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 51.4 | 1.4e-16 | 60 | 107 | 3 | 50 |
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 ie k tfskRr+g++KKA+ LSvLC ++vav+ +s+ + y y+ evm.model.AsparagusV1_03.1585 60 IEKKEAGGGTFSKRRQGLFKKASDLSVLCVVDVAVLALSEAENPYCYA 107 555666667*******************************99888776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 178 aa Download sequence |
MRIITSVMTM RPLSLSFDEP SNTEKLIDGA RELQRPRRRP WIPPCAPEEV GGRYPLIVKI 60 EKKEAGGGTF SKRRQGLFKK ASDLSVLCVV DVAVLALSEA ENPYCYASTP SLIRRILSTS 120 PPAPSSSSSS DNVDELWWEE EPIERMSLDE LRVFRGQLAR EMQSIEAEEG GFSRSRP* |